true

Dataset/experiment code: My_experiment_123

Grouping information summary:

Group N
x1_50 4
x1_7 4

Total number of features that are differentially abundant: 12962

Number of interesting/selected features that are differentially expressed: 702

Note: p-values of interesting/selected features were independently corrected using BH method.

print(sessionInfo())
## R version 4.1.0 (2021-05-18)
## Platform: x86_64-w64-mingw32/x64 (64-bit)
## Running under: Windows 10 x64 (build 22000)
## 
## Matrix products: default
## 
## locale:
## [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252    LC_MONETARY=English_United States.1252
## [4] LC_NUMERIC=C                           LC_TIME=English_United States.1252    
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
##  [1] plotly_4.9.4.1   reshape_0.8.8    kableExtra_1.3.4 knitr_1.33       ggplot2_3.3.5    tidyr_1.1.3     
##  [7] rmarkdown_2.10   limma_3.48.3     stringr_1.4.0    tibble_3.1.2     dplyr_1.0.7      shiny_1.6.0     
## 
## loaded via a namespace (and not attached):
##  [1] Rcpp_1.0.7          svglite_2.0.0       gitcreds_0.1.1      assertthat_0.2.1    digest_0.6.27      
##  [6] utf8_1.2.1          mime_0.11           plyr_1.8.6          R6_2.5.1            evaluate_0.14      
## [11] highr_0.9           httr_1.4.2          colourpicker_1.1.0  pillar_1.6.2        rlang_0.4.11       
## [16] lazyeval_0.2.2      rstudioapi_0.13     data.table_1.14.0   miniUI_0.1.1.1      jquerylib_0.1.4    
## [21] labeling_0.4.2      shinyjs_2.0.0       webshot_0.5.2       htmlwidgets_1.5.3   munsell_0.5.0      
## [26] compiler_4.1.0      httpuv_1.6.2        xfun_0.24           systemfonts_1.0.2   pkgconfig_2.0.3    
## [31] htmltools_0.5.1.1   tidyselect_1.1.1    fansi_0.5.0         viridisLite_0.4.0   crayon_1.4.1       
## [36] withr_2.4.2         later_1.3.0         MASS_7.3-54         grid_4.1.0          jsonlite_1.7.2     
## [41] xtable_1.8-4        gtable_0.3.0        lifecycle_1.0.0     DBI_1.1.1           magrittr_2.0.1     
## [46] scales_1.1.1        cli_3.0.1           stringi_1.7.4       cachem_1.0.6        farver_2.1.0       
## [51] fs_1.5.0            promises_1.2.0.1    xml2_1.3.2          bslib_0.2.5.1       ellipsis_0.3.2     
## [56] generics_0.1.0      vctrs_0.3.8         tools_4.1.0         Cairo_1.5-12.2      glue_1.4.2         
## [61] purrr_0.3.4         crosstalk_1.1.1     rsconnect_0.8.24    fastmap_1.1.0       yaml_2.2.1         
## [66] colorspace_2.0-1    BiocManager_1.30.16 rvest_1.0.1         sass_0.4.0          usethis_2.0.1